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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 914 | CRISPResso2 | Systems Biology | Systems Biology | 29.34 | +3% |
| 498 | CRISPRcleanR | Systems Biology | Systems Biology | 35.8 | +8% |
Data as of: Apr 12, 2026
| 620 |
| CRISPR-DAV |
| Systems Biology |
| Systems Biology |
| 35.74 |
| +8% |
| 207 | Cramino | QC & Preprocessing | QC & Preprocessing | 38.8 | +8% |
| 989 | CRAM Tools | Utilities & Infrastructure | Utilities & Infrastructure | 28.8 | +3% |
| 1183 | CRABS (Creating Reference databases for Amplicon-Based Sequencing) | Metagenomics | Metagenomics | 26.7 | +3% |
| 913 | CPTAC Pipelines | Utilities & Infrastructure | Utilities & Infrastructure | 29.34 | +3% |
| 1182 | CPSR | Clinical Genomics | Clinical Genomics | 26.7 | +3% |
| 1613 | CPA | Machine Learning | Machine Learning | 24.3 | +3% |
| 1612 | coxph | Statistics | Statistics | 24.3 | +3% |