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Add BioContext7 to your AI coding assistant. Every client below supports the Model Context Protocol (MCP) and can connect via local stdio or remote HTTP.
Sends an MCP initialize request to https://biocontext7-api.fly.dev/mcp
Quick start
npx @biocontext7/mcpRuns the BioContext7 MCP server locally via stdio. Point any MCP-compatible client at this command.
The four primary setup paths surfaced above the fold.
One-click install
claude mcp add biocontext7 -- npx @biocontext7/mcpRemote (HTTP)
{
"mcpServers": {
"biocontext7": {
"type": "http",
"url": "https://biocontext7-api.fly.dev/mcp"
}
}
}Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add to ~/.claude/settings.json or project .mcp.json. The one-click command registers the server automatically.
Remote (HTTP)
{
"mcpServers": {
"biocontext7": {
"url": "https://biocontext7-api.fly.dev/mcp"
}
}
}Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add to .cursor/mcp.json in your project root. Cursor supports both remote and local MCP servers.
Remote (HTTP)
{
"mcp": {
"servers": {
"biocontext7": {
"type": "http",
"url": "https://biocontext7-api.fly.dev/mcp"
}
}
}
}Local (stdio)
{
"mcp": {
"servers": {
"biocontext7": {
"type": "stdio",
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}
}Add to .vscode/settings.json. Requires the GitHub Copilot extension with MCP support enabled. You can also use the command palette: MCP: Add Server.
Remote (HTTP)
{
"mcpServers": {
"biocontext7": {
"type": "http",
"url": "https://biocontext7-api.fly.dev/mcp"
}
}
}Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add to claude_desktop_config.json. On macOS: ~/Library/Application Support/Claude/claude_desktop_config.json. On Windows: %APPDATA%\Claude\claude_desktop_config.json.
Additional clients and runtime options that also support the BioContext7 MCP server.
Remote (HTTP)
{
"mcpServers": {
"biocontext7": {
"serverUrl": "https://biocontext7-api.fly.dev/mcp"
}
}
}Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add to ~/.codeium/windsurf/mcp_config.json. Open Windsurf Settings > MCP to manage servers via the UI.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Go to Settings > Tools > AI Assistant > MCP Servers > Add. Paste the config above. Requires JetBrains IDE 2025.1+ with AI Assistant plugin.
Local (stdio)
{
"context_servers": {
"biocontext7": {
"command": {
"path": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}
}Add to ~/.config/zed/settings.json under the context_servers key.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Open Cline settings in VS Code, navigate to MCP Servers, and add the config above. Cline uses the same MCP server format as Claude Desktop.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add to ~/.aws/amazonq/mcp.json. Requires Amazon Q Developer CLI with MCP support.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Open Roo Code settings, navigate to MCP Servers, and add the config. Compatible with the Claude Desktop MCP format.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add via Kilo Code MCP settings panel in VS Code.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add via Augment Code MCP settings in your IDE extension.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add to ~/.amp/config.json under mcpServers.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add to Warp MCP configuration. Open Warp Settings > AI > MCP Servers.
Local (stdio)
{
"mcpServers": {
"biocontext7": {
"command": "npx",
"args": [
"-y",
"@biocontext7/mcp"
]
}
}
}Add via LM Studio MCP integration panel. Requires LM Studio 0.3+ with MCP support.
Local (stdio)
docker run -i --rm ghcr.io/hordago-labs/biocontext7-mcpRun the official BioContext7 MCP container. Use with any MCP client that supports stdio by setting the command to docker and the args to the run parameters above.
| Transport | Command | Use case |
|---|---|---|
| stdio | npx @biocontext7/mcp | Local IDE usage (default) |
| SSE | npx @biocontext7/mcp --transport sse | Streaming clients |
| HTTP | npx @biocontext7/mcp --transport http | Remote / shared access |
| Variable | Default | Description |
|---|---|---|
| BIOCONTEXT7_API_URL | https://biocontext7-api.fly.dev | Backend API base URL |
| BIOCONTEXT7_API_KEY | — | API key for authentication |
| PORT | 3100 | Port for SSE / HTTP transports |
Server not starting?
Make sure Node.js 18+ is installed and npx is available on your PATH. Run npx @biocontext7/mcp directly in your terminal to test.
Tools not appearing?
Restart your IDE after adding the MCP config. Some clients require a full restart rather than just a reload.
Connection timeout?
For remote HTTP configs, verify that https://biocontext7-api.fly.dev/mcp is reachable from your network. Switch to local stdio as a fallback.