UniProt API Tools

EMBL-EBI (European Bioinformatics Institute) — access bioinformatics databases and analysis services from EMBL-EBI including EBI Search for cross-database discovery, EMBL-EBI Tools Job Dispatcher for

2 shared topics • 2 shared operations

Ensembl Compara — comparative genomics database and API from EMBL-EBI providing pairwise and multiple whole-genome alignments, gene trees, protein families, orthologues, paralogues, and synteny region

2 shared topics • 2 shared operations

Ensembl Database — EMBL-EBI's comprehensive genome annotation database covering 300+ species with gene models, variants, regulatory features, and comparative genomics. Query via REST API at rest.ensem

2 shared topics • 2 shared operations

Ensembl REST API — HTTP/JSON web service for programmatic access to Ensembl genomic data without installing local databases. Supports gene/transcript/protein lookup by stable ID or gene symbol, sequen

2 shared topics • 2 shared operations

MAKER — portable genome annotation pipeline that integrates ab initio gene predictors (SNAP, Augustus, GeneMark), protein and EST evidence alignment, and repeat masking to produce GFF3 gene models wit

2 shared topics • 2 shared operations