TriTrypDB

FUMA (Functional Mapping and Annotation of Genome-Wide Association Studies) maps GWAS summary statistics to genes and biological functions via three complementary strategies: positional mapping, eQTL

2 shared topics • 2 shared operations

Gramene — comparative plant genomics database covering 100+ plant genomes including rice, maize, wheat, sorghum, and Arabidopsis. Provides gene search, cross-species ortholog and paralog mapping via g

2 shared topics • 2 shared operations

STRING-db — protein-protein interaction (PPI) network database and API covering known and predicted interactions for over 67 million proteins across 14,000 organisms. Query functional protein associat

2 shared topics • 2 shared operations

MAGeCK-VISPR — comprehensive CRISPR screen analysis framework combining MAGeCK statistical testing (RRA and MLE algorithms) with VISPR interactive visualization. Supports sgRNA count generation from F

2 shared topics • 1 shared operation

VIBRANT — metagenomics tool for identifying and annotating viruses from microbial assemblies (metagenomes, isolates, and virome datasets). Uses neural networks and KEGG/Pfam/VOG HMM profiles to classi

2 shared topics • 1 shared operation