MAGeCK-VISPR

ENIGMA Toolbox — Python/MATLAB framework for cross-disorder neuroimaging and genomics analysis using ENIGMA consortium summary statistics. Loads precomputed subcortical and cortical disorder effect si

3 shared topics • 1 shared operation

MetaboAnalyst — comprehensive R package and web platform for metabolomics data analysis and interpretation. Provides statistical analysis (t-test, ANOVA, PCA, PLS-DA), pathway analysis (KEGG, SMPDB),

2 shared topics • 2 shared operations

clusterProfiler — universal enrichment analysis tool for interpreting omics data using Gene Ontology, KEGG pathways, WikiPathways, Reactome, Disease Ontology, and custom gene sets. Implements over-rep

2 shared topics • 1 shared operation

EIGENSOFT / smartpca — suite for population structure analysis and stratification correction in genome-wide genetic studies. smartpca performs principal component analysis (PCA) on genotype data to in

2 shared topics • 1 shared operation

scikit-allel — Python package for exploratory analysis of large-scale genetic variation data. Provides data structures for genotypes, haplotypes, and allele counts (GenotypeArray, HaplotypeArray, Alle

2 shared topics • 1 shared operation