Gramene — comparative plant genomics database covering 100+ plant genomes including rice, maize, wheat, sorghum, and Arabidopsis. Provides gene search, cross-species ortholog and paralog mapping via g
Use with AI
Install the MCP server or CLI to instantly fetch Gramene documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/gramene
FUMA (Functional Mapping and Annotation of Genome-Wide Association Studies) maps GWAS summary statistics to genes and biological functions via three complementary strategies: positional mapping, eQTL
2 shared topics • 3 shared operations
KEGG Database — Direct REST API access to KEGG (Kyoto Encyclopedia of Genes and Genomes) for biological pathway analysis, gene-pathway mapping, metabolic networks, drug interactions, and cross-databas
2 shared topics • 2 shared operations
Use when working with org.Mm.eg.db, mouse genome annotation, Mus musculus gene annotation in R, or Bioconductor AnnotationDbi lookups for mouse. The org.Mm.eg.db package provides genome-wide annotatio
2 shared topics • 2 shared operations
STRING-db — protein-protein interaction (PPI) network database and API covering known and predicted interactions for over 67 million proteins across 14,000 organisms. Query functional protein associat
2 shared topics • 2 shared operations
TriTrypDB is a VEuPathDB genomics platform for kinetoplastid parasites including Trypanosoma and Leishmania species. Use this skill for gene discovery, functional annotation lookup, orthology queries,
2 shared topics • 2 shared operations