KEGG Database

FUMA (Functional Mapping and Annotation of Genome-Wide Association Studies) maps GWAS summary statistics to genes and biological functions via three complementary strategies: positional mapping, eQTL

2 shared topics • 2 shared operations

Gramene — comparative plant genomics database covering 100+ plant genomes including rice, maize, wheat, sorghum, and Arabidopsis. Provides gene search, cross-species ortholog and paralog mapping via g

2 shared topics • 2 shared operations

BBMap/BBTools — suite of 265+ fast, multithreaded Java-based bioinformatics tools for DNA/RNA sequence analysis. Includes BBMap short read aligner, BBDuk adapter trimmer and quality filter, BBMerge pa

2 shared topics • 1 shared operation

MAGeCK-VISPR — comprehensive CRISPR screen analysis framework combining MAGeCK statistical testing (RRA and MLE algorithms) with VISPR interactive visualization. Supports sgRNA count generation from F

2 shared topics • 1 shared operation

medaka -- neural network-based tool from Oxford Nanopore Technologies for creating consensus sequences and calling variants from nanopore sequencing data. Polishes draft assemblies from Flye, miniasm,

2 shared topics • 1 shared operation