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Programmatic access to the U.S. EPA ToxCast and Tox21 high-throughput screening (HTS) bioactivity data via the CTX APIs. Use to query chemical hazard profiles, AC50 values, and hit-calls across thousa
Use with AI
Install the MCP server or CLI to instantly fetch Toxcast documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/toxcast
docker pull biocontainers/toxcast:unknownUse this skill for FPSim2, the RDKit-based Python toolkit for high-throughput molecular fingerprint similarity search. Covers fingerprint database creation with fpsim2-create-db or create_db_file, in-
1 shared topic • 1 shared operation
metaX routing skill for metabolomics and lipidomics data analysis. Use this skill when users mention metaX, metaXpipe, QC-RLSC normalization, metabolomics peak intensity normalization, LC-MS data prep
1 shared topic • 1 shared operation
Use when working with nf-core/rnafusion — a Nextflow pipeline for RNA fusion gene detection and quantification. Detects fusion transcripts from RNA-seq data using up to six callers (STAR-Fusion, Arrib
1 shared topic • 1 shared operation
pigz (Parallel Implementation of GZip) — multi-threaded drop-in replacement for gzip that compresses and decompresses files using multiple CPU cores. Supports gzip, zlib, and single-entry zip formats.
1 shared topic • 1 shared operation
seqtk — fast lightweight C toolkit for processing FASTA and FASTQ files. Supports format conversion (FASTQ↔FASTA), random subsampling, quality trimming, reverse complement, base composition, sequence
1 shared topic • 1 shared operation