MMseqs2

DIAMOND — fast protein alignment and translated DNA search tool, operating at 100x-10,000x the speed of BLAST. Aligns protein query sequences against protein reference databases (blastp) or translated

1 shared topic • 2 shared operations

Foldseek — fast protein structure search and clustering using the 3Di structural alphabet. Compares protein structures at sequence-search speed, supporting monomer and multimer searches, structural cl

1 shared topic • 2 shared operations

Deep learning system for protein structure prediction from amino acid sequence with atomic accuracy — revolutionized structural biology.

1 shared topic • 1 shared operation

Ensembl Database — EMBL-EBI's comprehensive genome annotation database covering 300+ species with gene models, variants, regulatory features, and comparative genomics. Query via REST API at rest.ensem

1 shared topic • 1 shared operation

Direct REST API access to UniProt (250M+ protein sequences, 570K+ reviewed Swiss-Prot entries). Protein search, FASTA/JSON retrieval, ID mapping across 200+ databases, batch retrieval, streaming, fiel

1 shared topic • 1 shared operation