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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1223 | eCAVIAR | Population Genetics | Population Genetics | 26.7 | +3% |
| 1222 | EAGER2 / nf-core/eager | Genomics | Genomics | 26.7 | +3% |
Data as of: Apr 12, 2026
| 1221 | Duplex-Seq-Pipeline | Genomics | Genomics | 26.7 | +3% |
| 1220 | DSS | Epigenomics | Epigenomics | 26.7 | +3% |
| 1219 | DropletUtils | Single-Cell | Single-Cell | 26.7 | +3% |
| 1218 | dreamlet | Transcriptomics | Transcriptomics | 26.7 | +3% |
| 1217 | dplyr | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |
| 1216 | DoubletFinder | Transcriptomics | Transcriptomics | 26.7 | +3% |
| 1215 | DOSE | Transcriptomics | Transcriptomics | 26.7 | +3% |
| 1214 | DoRothEA / CollecTRI | Systems Biology | Systems Biology | 26.7 | +3% |