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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 63 | Prodigal / Pyrodigal | Genomics | Genomics | 45.82 | +8% |
| 1546 | Prodigal | Metagenomics | Metagenomics | 25.68 | +3% |
Data as of: Apr 12, 2026
| 165 |
| PRINSEQ++ |
| QC & Preprocessing |
| QC & Preprocessing |
| 38.86 |
| +8% |
| 1805 | PrimerBLAST | Systems Biology | Systems Biology | 23.7 | +3% |
| 1030 | Primer3 | Systems Biology | Systems Biology | 27.3 | +3% |
| 1927 | PRIME-Del | Systems Biology | Systems Biology | 21.84 | +3% |
| 1978 | PrimateAI-3D | Genomics | Genomics | 21.3 | +3% |
| 1414 | PRIDE Tools | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |
| 811 | Preseq | QC & Preprocessing | QC & Preprocessing | 29.7 | +3% |
| 1413 | PrediXcan / MetaXcan | Population Genetics | Population Genetics | 26.7 | +3% |