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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1221 | Duplex-Seq-Pipeline | Genomics | Genomics | 26.7 | +3% |
| 1222 | EAGER2 / nf-core/eager | Genomics | Genomics | 26.7 | +3% |
Data as of: Apr 12, 2026
| 1223 | eCAVIAR | Population Genetics | Population Genetics | 26.7 | +3% |
| 1224 | Ecmwf Api Client | Other | Other | 26.7 | +3% |
| 1225 | Eemont | Other | Other | 26.7 | +3% |
| 1226 | elPrep | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |
| 1227 | EMBL-EBI | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |
| 1228 | ENCODE Pipeline ATAC-seq | Epigenomics | Epigenomics | 26.7 | +3% |
| 1229 | Enformer | Machine Learning | Machine Learning | 26.7 | +3% |
| 1230 | ENIGMA Toolbox | Systems Biology | Systems Biology | 26.7 | +3% |