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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 337 | Porechop | QC & Preprocessing | QC & Preprocessing | 38.74 | +8% |
| 338 | Sage | Proteomics | Proteomics | 38.74 | +8% |
Data as of: Apr 12, 2026
| 339 |
| scib -- Single-Cell Integration Benchmarking |
| Single-Cell |
| Single-Cell |
| 38.74 |
| +8% |
| 340 | Stacks | Other | Other | 38.74 | +8% |
| 341 | TRUST4 | Clinical Genomics | Clinical Genomics | 38.74 | +8% |
| 342 | UNITE | Metagenomics | Metagenomics | 38.74 | +8% |
| 343 | VarScan2 | Genomics | Genomics | 38.74 | +8% |
| 344 | YaHS | Genomics | Genomics | 38.74 | +8% |
| 345 | smartpca/EIGENSOFT | Genomics | Genomics | 38.68 | +8% |
| 346 | EDAM Ontology Explorer | Genomics | Genomics | 38.56 | +8% |