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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1813 | scran -- Single-Cell RNA-Seq Normalization and Analysis | Transcriptomics | Transcriptomics | 22.8 | +3% |
| 1812 | SpikeInterface | Systems Biology | Systems Biology | 22.86 | +3% |
Data as of: Apr 12, 2026
| 1811 | Bioconda | Workflows | Workflows | 23.04 | +3% |
| 1810 | AOP-Wiki | Other | Other | 23.28 | +3% |
| 1809 | Arriba | Transcriptomics | Transcriptomics | 23.4 | 0% |
| 1808 | valr | Utilities & Infrastructure | Utilities & Infrastructure | 23.7 | +3% |
| 1807 | UniProt API Tools | Utilities & Infrastructure | Utilities & Infrastructure | 23.7 | +3% |
| 1806 | Tree of Life Pipelines | Utilities & Infrastructure | Utilities & Infrastructure | 23.7 | +3% |
| 1805 | PrimerBLAST | Systems Biology | Systems Biology | 23.7 | +3% |
| 1804 | plyranges | Utilities & Infrastructure | Utilities & Infrastructure | 23.7 | +3% |