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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 172 | salmon | Transcriptomics | Transcriptomics | 38.86 | +8% |
| 173 | Sambamba | Genomics | Genomics | 38.86 | +8% |
Data as of: Apr 12, 2026
| 174 |
| SEACR (Sparse Enrichment Analysis for CUT&RUN) |
| Genomics |
| Genomics |
| 38.86 |
| +8% |
| 175 | seqtk | QC & Preprocessing | QC & Preprocessing | 38.86 | +8% |
| 176 | sleuth | Transcriptomics | Transcriptomics | 38.86 | +8% |
| 177 | SnapATAC2 | Single-Cell | Single-Cell | 38.86 | +8% |
| 178 | Sniffles2 | Genomics | Genomics | 38.86 | +8% |
| 179 | SOAPnuke | QC & Preprocessing | QC & Preprocessing | 38.86 | +8% |
| 180 | squigualiser | Genomics | Genomics | 38.86 | +8% |
| 181 | STAR-Fusion | Transcriptomics | Transcriptomics | 38.86 | +8% |