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SnapATAC2 — Python/Rust toolkit for single-cell ATAC-seq analysis. Provides fragment file import, cell-by-bin/peak matrix generation, spectral embedding dimensionality reduction, leiden clustering, MA
Use with AI
Install the MCP server or CLI to instantly fetch SnapATAC2 documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/snapatac2
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