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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 289 | SVIM | Genomics | Genomics | 38.8 | +8% |
| 1963 | SWAT (Soil and Water Assessment Tool) | Utilities & Infrastructure | Utilities & Infrastructure | 21.84 | +3% |
Data as of: Apr 12, 2026
| 290 |
| Sylph |
| Metagenomics |
| Metagenomics |
| 38.8 |
| +8% |
| 1482 | SymSim | QC & Preprocessing | QC & Preprocessing | 26.7 | +3% |
| 2039 | SynBioHub | Systems Biology | Systems Biology | 17.82 | +3% |
| 1483 | SynVisio | Other | Other | 26.7 | +3% |
| 1760 | systemPipeR | Workflows | Workflows | 24.3 | +3% |
| 106 | T Sne | Transcriptomics | Transcriptomics | 42.16 | +10% |
| 75 | t-SNE (Rtsne) | Statistics | Statistics | 44.98 | +8% |
| 823 | tabix | Utilities & Infrastructure | Utilities & Infrastructure | 29.7 | +3% |