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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 956 | pytest-workflow | Workflows | Workflows | 29.34 | +3% |
| 889 | PyTorch | Machine Learning | Machine Learning | 29.4 | +3% |
Data as of: Apr 12, 2026
| 1048 | PyTorch Geometric | Proteomics | Proteomics | 27.06 | +5% |
| 1417 | PyVista | Visualization | Visualization | 26.7 | +3% |
| 1933 | QGIS | Other | Other | 21.84 | +3% |
| 459 | QIIME 2 | Metagenomics | Metagenomics | 35.86 | +8% |
| 1728 | QIIME2 Food Plugins | Other | Other | 24.3 | +3% |
| 689 | QTLbase | Population Genetics | Population Genetics | 35.74 | +8% |
| 1418 | QTLtools | Population Genetics | Population Genetics | 26.7 | +3% |
| 169 | Qualimap | QC & Preprocessing | QC & Preprocessing | 38.86 | +8% |