QIIME 2

MIDORI Reference 2 (MIDORI2) is a curated reference database of eukaryotic mitochondrial DNA and amino acid sequences used for taxonomic assignment of environmental and metabarcoding samples. It provi

3 shared topics • 1 shared operation

Kaiju is a fast taxonomic classifier for metagenomic sequencing reads using protein-level sequence matching. Translates DNA reads into amino acid sequences and compares against NCBI protein reference

3 shared topics

Mothur is an open-source bioinformatics platform for microbial ecology analysis. Provides tools for 16S/18S/ITS amplicon sequence processing, OTU clustering, phylotype classification, ASV generation,

3 shared topics

Poetry is the Python dependency management and packaging tool for creating reproducible projects with pyproject.toml and poetry.lock. Use this skill for dependency resolution, virtual environment isol

2 shared topics

2 shared topics