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MIDORI Reference 2 (MIDORI2) is a curated reference database of eukaryotic mitochondrial DNA and amino acid sequences used for taxonomic assignment of environmental and metabarcoding samples. It provi
Use with AI
Install the MCP server or CLI to instantly fetch Midori documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/midori
QIIME 2 — open-source microbiome bioinformatics platform for amplicon and marker-gene analysis. Plugin-based architecture with semantic type system enforcing data compatibility between analysis steps.
3 shared topics • 1 shared operation
SourceTracker2 is a Bayesian microbial source-tracking tool that estimates source contributions to sink communities using Gibbs sampling. Use this skill for SourceTracker/SourceTracker2 workflows, mic
2 shared topics • 1 shared operation
INSaFLU-TELEVIR is a web-based (and locally installable) bioinformatics suite for viral genomic surveillance and metagenomics-based virus detection. It processes Illumina, Ion Torrent, and Oxford Nano
1 shared topic • 2 shared operations
2 shared topics
VirSorter2 is a multi-classifier pipeline for identifying DNA and RNA viral sequences from metagenomic and genomic assemblies. It supports dsDNA phage, ssDNA, RNA, NCLDV, and lavidaviridae groups, out
2 shared topics