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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 813 | RDP | Utilities & Infrastructure | Utilities & Infrastructure | 29.7 | +3% |
| 812 | pyBigWig | Utilities & Infrastructure | Utilities & Infrastructure | 29.7 | +3% |
Data as of: Apr 12, 2026
| 811 |
| Preseq |
| QC & Preprocessing |
| QC & Preprocessing |
| 29.7 |
| +3% |
| 810 | PPanGGOLiN | Metagenomics | Metagenomics | 29.7 | +3% |
| 809 | PLINK 2.0 | Genomics | Genomics | 29.7 | +3% |
| 808 | PICRUSt2 | Metagenomics | Metagenomics | 29.7 | +3% |
| 807 | phyloseq -- Microbiome Data Analysis in R | Metagenomics | Metagenomics | 29.7 | +3% |
| 806 | PHATE | Statistics | Statistics | 29.7 | +3% |
| 805 | PGS Catalog | Utilities & Infrastructure | Utilities & Infrastructure | 29.7 | +3% |
| 804 | PGGB | Genomics | Genomics | 29.7 | +5% |