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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 660 | Mesmer | Imaging | Imaging | 35.74 | +8% |
| 251 | MetaBAT2 | Metagenomics | Metagenomics | 38.8 | +8% |
| 542 | MetaboAnalyst | Proteomics | Proteomics | 35.8 | +8% |
| 1672 | MetaboLights | Utilities & Infrastructure | Utilities & Infrastructure | 24.3 | +3% |
| 1003 | Metabolights Tools | Systems Biology | Systems Biology | 28.5 | +3% |
| 543 | Metacell | Single-Cell | Single-Cell | 35.8 | +8% |
| 2000 | METAL | Population Genetics | Population Genetics | 20.28 | +3% |
| 1337 | MetaMaps | Metagenomics | Metagenomics | 26.7 | +3% |