Terra

Apache Arrow — cross-language columnar in-memory analytics format and ecosystem. Provides zero-copy IPC between Python, R, C++, Java, Go, and Rust via shared memory and the C Data Interface. Use for:

2 shared topics • 2 shared operations

Institute — utilities for discovering, querying, and downloading datasets from major genomics and bioinformatics research institutes, including Broad Institute (gnomAD, Terra, Hail), European Bioinfor

2 shared topics • 2 shared operations

NCBI/NIH tools — search, retrieve, and process biological data from NCBI databases (PubMed, GenBank, Gene, SRA, RefSeq, ClinVar, dbSNP, Taxonomy) using the NCBI E-utilities REST API and NCBI Datasets

2 shared topics • 2 shared operations

niffler — transparent compressed file I/O for Rust bioinformatics pipelines. Sniffs compression format from magic bytes using get_reader and from_path. Supports gzip, bzip2, xz/lzma, zstd, and BGZF (b

2 shared topics • 2 shared operations

Wm82-tools covers bioinformatics workflows for the Glycine max (soybean) Williams 82 (Wm82) reference genome — the primary reference for soybean genomics. Use cases: downloading and indexing Wm82 geno

2 shared topics • 2 shared operations