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ST Pipeline — automated processing pipeline for spatial transcriptomics (Spatial Transcriptomics method). Handles demultiplexing, quality trimming, contamination filtering, genome alignment, annotatio
Use with AI
Install the MCP server or CLI to instantly fetch ST Pipeline documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/spatialtranscriptomicsst-pipeline
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