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GiardiaDB — VEuPathDB genomic resource for the intestinal parasite Giardia lamblia (G. intestinalis, G. duodenalis). Provides gene search, BLAST, genome browsing, functional annotation, ortholog queri
Use with AI
Install the MCP server or CLI to instantly fetch GiardiaDB documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/giardiadb
CPTAC pipelines — Python toolkit for accessing and analyzing Clinical Proteomic Tumor Analysis Consortium (CPTAC) multi-omics cancer data. Provides programmatic download of proteomics, phosphoproteomi
2 shared topics • 1 shared operation
Phytozome utilities — search, browse, and download plant genome assemblies, gene annotations, protein sequences, and comparative genomics data from the JGI Phytozome plant genomics portal. Supports qu
2 shared topics • 1 shared operation
Trinotate — comprehensive functional annotation suite for transcriptome assemblies. Integrates BLAST/DIAMOND homology searches against SwissProt, HMMER/Pfam protein domain identification, SignalP sign
2 shared topics • 1 shared operation
Use when working with Crux — the University of Washington Noble Lab's open-source toolkit for bottom-up tandem mass spectrometry (MS/MS) proteomics analysis. Covers the full peptide identification pip
2 shared topics
pGlyco3 is an intact N- and O-glycopeptide search engine from pFind Studio. It uses a glycan-first search strategy with Y-ion evidence, supports monosaccharide modifications, provides glycan and pepti
2 shared topics