DBSCAN

CD-HIT — fast sequence clustering and redundancy reduction for protein and nucleotide sequences. Clusters FASTA sequences at a user-defined identity threshold to remove redundancy from databases. Prov

1 shared topic • 1 shared operation

openTSNE — modular Python library for t-distributed Stochastic Neighbor Embedding. Implements Barnes-Hut and FIt-SNE (interpolation-based) acceleration for scalable O(n log n) / near-linear t-SNE on l

1 shared topic • 1 shared operation

scGen — deep learning framework for predicting single-cell perturbation responses using variational autoencoders. Predicts how cells respond to unseen conditions (drug treatment, genetic knockout, dis

1 shared topic • 1 shared operation

t-SNE (t-distributed Stochastic Neighbor Embedding) for nonlinear dimensionality reduction and visualization of high-dimensional data. Covers Barnes-Hut and exact modes, FIt-SNE/openTSNE interpolation

1 shared topic • 1 shared operation

t-SNE via Rtsne — Barnes-Hut t-distributed Stochastic Neighbor Embedding for nonlinear dimensionality reduction and visualization. Wraps Van der Maaten's C++ Barnes-Hut implementation for O(n log n) c

1 shared topic • 1 shared operation