Dandelion

FUMA (Functional Mapping and Annotation of Genome-Wide Association Studies) maps GWAS summary statistics to genes and biological functions via three complementary strategies: positional mapping, eQTL

3 shared topics

Autoreject is a Python library for automated rejection and repair of bad EEG and MEG epochs. It uses cross-validation to find optimal peak-to-peak amplitude rejection thresholds per channel, then eith

2 shared topics • 1 shared operation

MAGeCK-VISPR — comprehensive CRISPR screen analysis framework combining MAGeCK statistical testing (RRA and MLE algorithms) with VISPR interactive visualization. Supports sgRNA count generation from F

2 shared topics • 1 shared operation

Use when working with OBO Foundry ontologies or the OBO tooling ecosystem: pronto (Python OBO/OWL parser), ROBOT (Java CLI for ontology operations), oaklib/OAK (Ontology Access Kit), or fastobo. Cover

2 shared topics • 1 shared operation

Signac — R toolkit for single-cell chromatin accessibility analysis built on Seurat. Processes scATAC-seq data from 10x Genomics and other platforms. Handles fragment files, performs TF-IDF normalizat

2 shared topics • 1 shared operation