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Centrifuge is a rapid and memory-efficient metagenomic classifier for DNA sequences. Uses FM-index compression to classify reads against large reference databases including bacteria, archaea, viruses,
Use with AI
Install the MCP server or CLI to instantly fetch Centrifuge documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/centrifuge
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