Arvados

GenomePeek is a hosted marker-gene screen for rapid taxonomic inspection of prokaryotic genome and metagenome sequence files. It extracts reads matching conserved marker genes, assembles them, and cla

1 shared topic • 1 shared operation

rjags is the canonical R interface to JAGS (Just Another Gibbs Sampler), providing R functions for compiling BUGS-language models, running adaptive and burn-in phases, and drawing posterior samples as

1 shared topic • 1 shared operation

Ensembl Database — EMBL-EBI's comprehensive genome annotation database covering 300+ species with gene models, variants, regulatory features, and comparative genomics. Query via REST API at rest.ensem

1 shared topic

TCGAbiolinks for searching, downloading, and analyzing cancer genomics data from the NCI Genomic Data Commons (GDC). Routes tasks for GDCquery/GDCdownload, data preparation with GDCprepare, differenti

1 shared topic

Zarr — chunked, compressed N-dimensional arrays for Python with cloud-native storage. Provides hierarchical groups, pluggable compression codecs (Blosc, Zstd, Gzip), sharding for large-scale datasets,

1 shared topic