Apollo

Ensembl Vet Tools — bioinformatics resources for veterinary and livestock genomics using the Ensembl infrastructure. Covers genome browsing for FAO Priority Livestock Species (cattle, pig, chicken, sh

1 shared topic • 1 shared operation

vConTACT2 (Viral Contig Automatic Cluster Taxonomy 2) clusters prokaryotic viral genomes and contigs by shared protein content to assign taxonomy context from reference viral genomes. Use when working

1 shared topic • 1 shared operation

Ensembl Database — EMBL-EBI's comprehensive genome annotation database covering 300+ species with gene models, variants, regulatory features, and comparative genomics. Query via REST API at rest.ensem

1 shared topic

TCGAbiolinks for searching, downloading, and analyzing cancer genomics data from the NCI Genomic Data Commons (GDC). Routes tasks for GDCquery/GDCdownload, data preparation with GDCprepare, differenti

1 shared topic

Zarr — chunked, compressed N-dimensional arrays for Python with cloud-native storage. Provides hierarchical groups, pluggable compression codecs (Blosc, Zstd, Gzip), sharding for large-scale datasets,

1 shared topic