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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 1081 |
| JupyterLab |
| Workflows |
| Workflows |
| 26.88 |
| +3% |
| 1066 | kableExtra | Visualization | Visualization | 26.94 | +3% |
| 387 | Kaiju | Metagenomics | Metagenomics | 36.4 | +8% |
| 14 | Kallisto | Transcriptomics | Transcriptomics | 63.88 | +17% |
| 446 | karyoploteR | Imaging | Imaging | 35.86 | +8% |
| 324 | kb-python | Single-Cell | Single-Cell | 38.74 | +8% |
| 1800 | KEGG Database | Genomics | Genomics | 23.7 | +3% |
| 534 | KEGG Tools | Utilities & Infrastructure | Utilities & Infrastructure | 35.8 | +8% |