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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 785 |
| HOMER (Hypergeometric Optimization of Motif EnRichment) |
| Transcriptomics |
| Transcriptomics |
| 29.7 |
| +3% |
| 1974 | Horvath Clock | Epigenomics | Epigenomics | 21.3 | +3% |
| 1975 | HostDB | Metagenomics | Metagenomics | 21.3 | +3% |
| 1651 | Hover-Net | Imaging | Imaging | 24.3 | +3% |
| 1652 | HPO Tools | Utilities & Infrastructure | Utilities & Infrastructure | 24.3 | +3% |
| 786 | HPRC Tools | Genomics | Genomics | 29.7 | +3% |
| 232 | HTSeq | Genomics | Genomics | 38.8 | +8% |
| 1002 | htsget | Utilities & Infrastructure | Utilities & Infrastructure | 28.74 | +3% |