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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1542 | AUGUSTUS -- Eukaryotic Gene Prediction | Transcriptomics | Transcriptomics | 25.8 | +3% |
| 1543 | AlphaFold Database | Proteomics | Proteomics | 25.68 | +3% |
Data as of: Apr 12, 2026
| 1544 | IQ-TREE | Phylogenetics | Phylogenetics | 25.68 | +3% |
| 1545 | Pierian Dx (Velsera) | Genomics | Genomics | 25.68 | +3% |
| 1546 | Prodigal | Metagenomics | Metagenomics | 25.68 | +3% |
| 1547 | MetaPhlAn 4 / StrainPhlAn 4 | Phylogenetics | Phylogenetics | 25.38 | +3% |
| 1548 | NetworkX | Machine Learning | Machine Learning | 25.38 | +3% |
| 1549 | HL7 FHIR Genomics | Clinical Genomics | Clinical Genomics | 25.32 | +3% |
| 1553 | Seqera Platform | Workflows | Workflows | 24.54 | +3% |
| 1554 | Autoreject | Systems Biology | Systems Biology | 24.36 | +3% |