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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 731 | Pipeline Composer | Transcriptomics | Transcriptomics | 35.5 | +8% |
| 732 | Protégé | Systems Biology | Systems Biology | 35.5 | +8% |
Data as of: Apr 12, 2026
| 733 |
| Vcontact2 |
| Metagenomics |
| Metagenomics |
| 35.44 |
| +5% |
| 734 | Virsorter2 | Metagenomics | Metagenomics | 35.2 | +10% |
| 735 | ClinVar Database | Genomics | Genomics | 35.08 | +8% |
| 736 | GREML (GCTA) | Population Genetics | Population Genetics | 34.78 | +8% |
| 737 | Find Alternative Tools | Utilities & Infrastructure | Utilities & Infrastructure | 30.3 | +3% |
| 738 | scipyoptimize | Statistics | Statistics | 30.18 | +3% |
| 739 | BEAST2 | Phylogenetics | Phylogenetics | 30 | +3% |
| 740 | Docker | Workflows | Workflows | 30 | +5% |