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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1561 | scJoint | Systems Biology | Systems Biology | 24.36 | +3% |
| 1745 | scispaCy | Machine Learning | Machine Learning | 24.3 | +3% |
Data as of: Apr 12, 2026
| 703 |
| scirpy -- Single-Cell Immune Receptor Analysis |
| Genomics |
| Genomics |
| 35.74 |
| +8% |
| 738 | scipyoptimize | Statistics | Statistics | 30.18 | +3% |
| 280 | SciPy | Utilities & Infrastructure | Utilities & Infrastructure | 38.8 | +8% |
| 702 | sciPENN | Systems Biology | Systems Biology | 35.74 | +8% |
| 1444 | scimap | Imaging | Imaging | 26.7 | +3% |
| 1948 | scikit-survival | Utilities & Infrastructure | Utilities & Infrastructure | 21.84 | +3% |
| 1443 | scikit-learn | Machine Learning | Machine Learning | 26.7 | +3% |
| 701 | scikit-image | Imaging | Imaging | 35.74 | +8% |