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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 351 |
| AnnData |
| Single-Cell |
| Single-Cell |
| 37.3 |
| +8% |
| 352 | SBOLDesigner | Systems Biology | Systems Biology | 37.3 | +8% |
| 353 | UNOISE3 | Metagenomics | Metagenomics | 36.76 | +8% |
| 362 | GiardiaDB | Metagenomics | Metagenomics | 36.7 | +8% |
| 363 | Bio-Formats | Imaging | Imaging | 36.52 | +8% |
| 364 | cyvcf2 | Genomics | Genomics | 36.52 | +8% |
| 365 | OrthoFinder | Phylogenetics | Phylogenetics | 36.52 | +8% |
| 366 | bedGraphToBigWig | Epigenomics | Epigenomics | 36.46 | +8% |