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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 203 | BUStools | Single-Cell | Single-Cell | 38.8 | +8% |
| 204 | Canu | Genomics | Genomics | 38.8 | +8% |
| 205 | CD-HIT | Phylogenetics | Phylogenetics | 38.8 | +8% |
| 206 | Chromosight | Genomics | Genomics | 38.8 | +8% |
| 207 | Cramino | QC & Preprocessing | QC & Preprocessing | 38.8 | +8% |
| 208 | csvtk | Utilities & Infrastructure | Utilities & Infrastructure | 38.8 | +8% |
| 209 | Cufflinks | Transcriptomics | Transcriptomics | 38.8 | +8% |
| 210 | DAS Tool | Metagenomics | Metagenomics | 38.8 | +8% |