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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 147 |
| Bowtie2 |
| Genomics |
| Genomics |
| 38.86 |
| +8% |
| 1584 | BPCells | Single-Cell | Single-Cell | 24.3 | +3% |
| 1585 | BPNet | Genomics | Genomics | 24.3 | +3% |
| 367 | Bracken | Genomics | Genomics | 36.46 | +8% |
| 1152 | Brain Connectivity Toolbox (bctpy) | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |
| 848 | BrainGlobe Atlas API | Imaging | Imaging | 29.4 | +3% |
| 1153 | BrainMap/Neurosynth | Systems Biology | Systems Biology | 26.7 | +3% |
| 1855 | Brainnetome Atlas | Utilities & Infrastructure | Utilities & Infrastructure | 21.84 | +3% |