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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 5 | STAR | Transcriptomics | Transcriptomics | 67.48 | +15% |
| 6 | edgeR | Transcriptomics | Transcriptomics | 66.28 | +15% |
Data as of: Apr 12, 2026
| 7 |
| Nextflow |
| Workflows |
| Workflows |
| 65.68 |
| +15% |
| 9 | Picard | Genomics | Genomics | 65.08 | +15% |
| 11 | Minimap2 | Genomics | Genomics | 64.48 | +15% |
| 15 | Prokka | Genomics | Genomics | 63.4 | +15% |
| 16 | Cutadapt | QC & Preprocessing | QC & Preprocessing | 63.28 | +15% |
| 17 | PAINTOR | Population Genetics | Population Genetics | 62.8 | +15% |
| 18 | SNPlocs.Hsapiens.dbSNP155.GRCh38 | Utilities & Infrastructure | Utilities & Infrastructure | 62.74 | +15% |
| 19 | MetaPhlAn | Metagenomics | Metagenomics | 62.68 | +15% |