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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 139 |
| BWA-MEM2 |
| Genomics |
| Genomics |
| 38.92 |
| +8% |
| 140 | GATK HaplotypeCaller | Genomics | Genomics | 38.92 | +8% |
| 141 | ProteoWizard msconvert | Proteomics | Proteomics | 38.92 | +8% |
| 138 | Bio Context Lookup | Transcriptomics | Transcriptomics | 38.98 | +10% |
| 137 | ChAMP | Epigenomics | Epigenomics | 39.16 | +10% |
| 136 | Infernal | Structure Prediction | Structure Prediction | 39.34 | +10% |
| 135 | MRtrix3 | Imaging | Imaging | 39.4 | +10% |
| 133 | Cftime | Other | Other | 39.7 | +8% |