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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1452 | SignalP | Genomics | Genomics | 26.7 | +3% |
| 581 | SigProfiler | Clinical Genomics | Clinical Genomics | 35.8 | +8% |
Data as of: Apr 12, 2026
| 1453 | SILVA | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |
| 1951 | SimBiology | Systems Biology | Systems Biology | 21.84 | +3% |
| 709 | SimpleITK | Imaging | Imaging | 35.74 | +8% |
| 1747 | SingleCellExperiment | Machine Learning | Machine Learning | 24.3 | +3% |
| 1454 | SingleR | Single-Cell | Single-Cell | 26.7 | +3% |
| 374 | Singularity/Apptainer | Workflows | Workflows | 36.46 | +10% |
| 582 | SIP | Genomics | Genomics | 35.8 | +8% |
| 820 | SIRIUS | Systems Biology | Systems Biology | 29.7 | +3% |