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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 597 | wgbs_tools | Epigenomics | Epigenomics | 35.8 | +8% |
| 598 | WGCNA | Transcriptomics | Transcriptomics | 35.8 | +8% |
Data as of: Apr 12, 2026
| 428 | ballgown | Transcriptomics | Transcriptomics | 35.86 | +8% |
| 429 | BOLT-LMM | Genomics | Genomics | 35.86 | +8% |
| 430 | Cellpose | Imaging | Imaging | 35.86 | +8% |
| 431 | UCSF ChimeraX | Structure Prediction | Structure Prediction | 35.86 | +8% |
| 432 | clusterProfiler | Transcriptomics | Transcriptomics | 35.86 | +8% |
| 433 | CytoTRACE -- Predicting Differentiation State from scRNA-seq | Transcriptomics | Transcriptomics | 35.86 | +8% |
| 434 | DECIPHER | Utilities & Infrastructure | Utilities & Infrastructure | 35.86 | +8% |
| 435 | Decontx | Single-Cell | Single-Cell | 35.86 | +8% |