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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 523 | Human Cell Atlas Tools | Utilities & Infrastructure | Utilities & Infrastructure | 35.8 | +8% |
| 1653 | Hugging Face Transformers | Machine Learning | Machine Learning | 24.3 |
Data as of: Apr 12, 2026
| 386 | HTSlib | Genomics | Genomics | 36.4 | +8% |
| 1002 | htsget | Utilities & Infrastructure | Utilities & Infrastructure | 28.74 | +3% |
| 232 | HTSeq | Genomics | Genomics | 38.8 | +8% |
| 786 | HPRC Tools | Genomics | Genomics | 29.7 | +3% |
| 1652 | HPO Tools | Utilities & Infrastructure | Utilities & Infrastructure | 24.3 | +3% |
| 1651 | Hover-Net | Imaging | Imaging | 24.3 | +3% |
| 1975 | HostDB | Metagenomics | Metagenomics | 21.3 | +3% |
| 1974 | Horvath Clock | Epigenomics | Epigenomics | 21.3 | +3% |