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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 1670 |
| mclust |
| Statistics |
| Statistics |
| 24.3 |
| +3% |
| 935 | MCIA | Systems Biology | Systems Biology | 29.34 | +3% |
| 730 | MBASED | Transcriptomics | Transcriptomics | 35.5 | +8% |
| 450 | MaxQuant | Proteomics | Proteomics | 35.86 | +8% |
| 1904 | MaxEnt | Other | Other | 21.84 | +3% |
| 389 | MaxBin2 | Metagenomics | Metagenomics | 36.4 | +8% |
| 1333 | MaveDB | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |
| 111 | matUtils | Phylogenetics | Phylogenetics | 41.8 | +10% |