Loading homepage
Top bioinformatics tools ranked by usage across 144 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 25 | Strelka2 | Transcriptomics | Transcriptomics | 38.8 | +8% |
| 26 | BBKNN -- Batch Balanced K Nearest Neighbours | Transcriptomics | Transcriptomics | 38.74 |
Data as of: Apr 12, 2026
| 27 | EAGLE | Transcriptomics | Transcriptomics | 38.74 | +8% |
| 28 | GATK4 (Genome Analysis Toolkit) | Transcriptomics | Transcriptomics | 38.74 | +8% |
| 29 | Corset | Transcriptomics | Transcriptomics | 36.4 | +8% |
| 30 | cell2location | Transcriptomics | Transcriptomics | 35.92 | +8% |
| 31 | ballgown | Transcriptomics | Transcriptomics | 35.86 | +8% |
| 32 | clusterProfiler | Transcriptomics | Transcriptomics | 35.86 | +8% |
| 33 | CytoTRACE -- Predicting Differentiation State from scRNA-seq | Transcriptomics | Transcriptomics | 35.86 | +8% |
| 34 | IsoformSwitchAnalyzeR | Transcriptomics | Transcriptomics | 35.86 | +8% |