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Top bioinformatics tools ranked by usage across 104 tools.
Data as of: Apr 12, 2026
| 27 | Cumulus | Single-Cell | Single-Cell | 35.8 | +8% |
| 66 | CUT&RUNTools 2.0 | Single-Cell | Single-Cell | 26.7 | +3% |
| 67 | CyTOF Workflow (CATALYST) | Single-Cell | Single-Cell | 26.7 | +3% |
| 102 | CytoML | Single-Cell | Single-Cell | 21.84 | +3% |
| 92 | CZ CELLxGENE Census | Single-Cell | Single-Cell | 24.3 | +3% |
| 13 | DBSCAN | Single-Cell | Single-Cell | 37.66 | +8% |
| 16 | Decontx | Single-Cell | Single-Cell | 35.86 | +8% |
| 68 | DEsingle | Single-Cell | Single-Cell | 26.7 | +3% |