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Top bioinformatics tools ranked by usage across 64 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1 | Reactome Database | Proteomics | Proteomics | 46.96 | +8% |
| 32 | RFdiffusion -- Protein Structure Generation via Diffusion | Proteomics | Proteomics | 35.74 |
Data as of: Apr 12, 2026
| 33 | RNA-FM | Proteomics | Proteomics | 35.74 | +8% |
| 9 | Sage | Proteomics | Proteomics | 38.74 | +8% |
| 16 | Skyline | Proteomics | Proteomics | 35.86 | +8% |
| 34 | Spectronaut -- DIA Proteomics Analysis | Proteomics | Proteomics | 35.74 | +8% |
| 2 | STRING Database | Proteomics | Proteomics | 45.22 | +8% |
| 61 | TAPE | Proteomics | Proteomics | 24.3 | +3% |
| 62 | Tdfragmapper | Proteomics | Proteomics | 22.68 | +3% |
| 4 | ThermoRawFileParser | Proteomics | Proteomics | 41.8 | +10% |