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UnMICST (Universal Multiplexed Image Segmentation and Classification Tool) — deep-learning nuclear segmentation for multiplexed tissue imaging. Generates probability maps (background, nucleus interior
Use with AI
Install the MCP server or CLI to instantly fetch UnMICST documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/unmicst
docker pull biocontainers/unmicst:2.6.6Bio-Formats — Java library for reading and writing microscopy image formats. Supports 160+ file formats including OME-TIFF, CZI (Zeiss), LIF (Leica), ND2 (Nikon), VSI (Olympus), and proprietary vendor
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