Tax4Fun2

Use when working with dental or oral microbiome analysis — profiling microbial communities from saliva, dental plaque, gingival crevicular fluid, tongue dorsum, or buccal mucosa. Covers 16S rRNA ampli

2 shared topics • 1 shared operation

Kaiju is a fast taxonomic classifier for metagenomic sequencing reads using protein-level sequence matching. Translates DNA reads into amino acid sequences and compares against NCBI protein reference

2 shared topics • 1 shared operation

metaSPAdes — de novo metagenomic assembler from the SPAdes suite using iterative de Bruijn graphs with multiple k-mer sizes optimized for uneven-coverage metagenomes. Assembles short-read (Illumina pa

2 shared topics • 1 shared operation

2 shared topics • 1 shared operation

VirSorter2 is a multi-classifier pipeline for identifying DNA and RNA viral sequences from metagenomic and genomic assemblies. It supports dsDNA phage, ssDNA, RNA, NCLDV, and lavidaviridae groups, out

2 shared topics • 1 shared operation