Sickle

Trimmomatic — flexible, multithreaded read trimming tool for Illumina sequence data. Performs adapter removal (palindrome and simple modes), quality trimming (sliding window, leading/trailing), hard c

2 shared topics • 3 shared operations

NanoPlot — visualization and quality-control tool for Oxford Nanopore long-read sequencing data. Generates read length histograms, quality distribution plots, cumulative yield curves, and alignment id

2 shared topics • 2 shared operations

PRINSEQ++ — high-performance C++ tool for quality control and preprocessing of FASTQ sequencing reads. Filters and trims reads by quality score, length, GC content, sequence complexity (DUST/entropy),

2 shared topics • 2 shared operations

vt — C++ command-line variant tool set for manipulating VCF files. Provides variant normalization (left-alignment and trimming), multiallelic decomposition, VCF summary statistics (peek), annotation,

2 shared topics • 2 shared operations

Removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.

1 shared topic • 3 shared operations